STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
105.t00019Uncharacterized protein. (133 aa)    
Predicted Functional Partners:
51.t00031
DNA-directed RNA polymerases I, II, and III 23 kDa, putative.
   
 
  0.552
344.t00001
DNA-directed RNA polymerase II subunit, putative.
   
 
  0.550
10.t00022
DNA-directed RNA polymerase III subunit, putative.
   
 
  0.549
200.t00008
RNA polymerase subunit Rpb5, putative.
   
 
  0.549
7.t00016
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
 
  0.547
279.t00017
Uncharacterized protein.
   
 
  0.547
24.t00027
RNA polymerase III subunit, putative.
   
 
  0.545
59.t00015
DNA-directed RNA polymerase subunit N, putative.
   
 
  0.544
73.t00023
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
  0.542
178.t00011
Uncharacterized protein.
     
  0.540
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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