STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
36.t00025Aminotransferase, putative. (396 aa)    
Predicted Functional Partners:
ODC
Ornithine decarboxylase, putative; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.841
11.t00057
Uncharacterized protein.
  
 
 0.764
206.t00014
Valyl-tRNA synthetase, putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.701
46.t00025
Isopentenyl-diphosphate delta-isomerase, putative.
  
 
 0.683
345.t00008
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.679
1.t00107
Aspartate--ammonia ligase, putative.
     
 0.671
337.t00001
Enolase, putative.
  
 0.659
377.t00001
NAD-specific glutamate dehydrogenase, putative.
  
 
 0.657
Mdh2
Malate dehydrogenase.
  
 0.654
425.t00002
Malic enzyme, putative.
  
 0.648
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.