STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
22.t00015Ribosomal protein L11 methyltransferase, putative. (183 aa)    
Predicted Functional Partners:
57.t00032
Uncharacterized protein.
   
 0.758
361.t00008
40S ribosomal protein S2, putative; Belongs to the universal ribosomal protein uS5 family.
    
 0.752
25.t00034
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
   
 0.717
114.t00007
Uncharacterized protein.
   
 0.674
76.t00028
RNA-binding protein, putative.
   
 0.651
88.t00030
Uncharacterized protein; Belongs to the NOB1 family.
   
 0.644
472.t00007
40S ribosomal protein S23, putative; Belongs to the universal ribosomal protein uS12 family.
   
 0.630
224.t00012
40S ribosomal protein S15a, putative; Belongs to the universal ribosomal protein uS8 family.
   
  0.627
376.t00009
Bystin, putative.
   
 0.615
EHI_174260
Uncharacterized protein.
   
 0.612
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.