STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
154.t00002DEAD/DEAH box helicase, putative. (500 aa)    
Predicted Functional Partners:
74.t00033
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.925
47.t00023
Uncharacterized protein.
   
 
 0.910
104.t00018
Uncharacterized protein.
   
 
 0.898
15.t00009
Uncharacterized protein.
   
 0.883
6.t00018
Helicase, putative.
  
 0.878
29.t00039
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
 0.872
7.t00057
Uncharacterized protein.
   
 0.869
166.t00002
DEAD/DEAH box helicase, putative.
  
 
0.862
64.t00021
Uncharacterized protein.
   
 0.843
39.t00016
BP28CT domain-containing protein.
   
 0.840
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.