STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
80.t00026Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (269 aa)    
Predicted Functional Partners:
303.t00006
Erf4 domain-containing protein.
   
 0.608
102.t00005
Uncharacterized protein.
    
 0.530
254.t00012
Centromere/microtubule binding protein cbf5, putative.
   
 0.492
106.t00024
RNA recognition motif domain containing protein.
    
 0.483
11.t00003
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 0.441
290.t00003
Mre11, putative.
   
 0.437
114.t00011
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
  
 
 0.435
115.t00023
ABC transporter, putative.
   
 
 0.434
4.t00022
Uncharacterized protein.
    
 0.433
44.t00003
Replication factor C subunit 4, putative.
   
 
 0.429
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.