STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
108.t00016Splicing factor 3b subunit 3, putative. (1108 aa)    
Predicted Functional Partners:
165.t00012
Splicing factor subunit; Belongs to the SF3B5 family.
   
 0.995
194.t00015
Splicing factor3B subunit 2, putative.
   
 0.994
230.t00015
Splicing factor, putative.
   
 0.994
135.t00015
Uncharacterized protein.
   
 0.993
18.t00059
Splicing factor 3a subunit 2, putative.
   
 0.991
48.t00017
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.990
31.t00014
Splicing factor 3B subunit 4, putative.
   
 0.988
243.t00007
Small nuclear ribonucleoprotein G.
   
 0.988
170.t00019
Small nuclear ribonucleoprotein Sm D2.
   
 0.987
7.t00018
Splicing factor 3A subunit 3, putative.
   
 0.986
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.