STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
16.t00057Ubiquitin carboxyl-terminal hydrolase family protein; Belongs to the peptidase C19 family. (806 aa)    
Predicted Functional Partners:
78.t00035
Uncharacterized protein.
   
 
  0.604
15.t00018
Uncharacterized protein.
   
 0.570
14.t00031
Uncharacterized protein.
   
 0.538
158.t00013
40S ribosomal protein S27a, putative.
   
 0.538
123.t00017
Vacuolar sorting protein VPS9, putative.
   
  0.483
7.t00076
Rho guanine nucleotide exchange factor, putative.
   
 
  0.458
84.t00019
Protein with RhoGEF and ArfGAP domains.
   
 
  0.456
221.t00013
Rho guanine nucleotide exchange factor, putative.
   
 
  0.455
333.t00006
UBA/TS-N domain-containing protein.
   
 0.436
63.t00016
Uncharacterized protein.
   
 
  0.430
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.