STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
108.t00020Ubiquitin-conjugating enzyme family protein; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)    
Predicted Functional Partners:
9.t00057
Ankyrin repeat/GTPase-activator domain containing protein.
   
 0.999
275.t00007
Uncharacterized protein.
   
 0.994
14.t00031
Uncharacterized protein.
   
 0.982
158.t00013
40S ribosomal protein S27a, putative.
   
 0.977
131.t00026
ADP-ribosylation factor, putative; Belongs to the small GTPase superfamily. Arf family.
  
 
 0.968
153.t00005
Zinc finger domain containing protein.
    
 0.930
EHI_038690
Ubiquitin-activating enzyme E1 1, putative.
   
 0.915
334.t00009
Ubiquitin-activating enzyme, putative; Belongs to the ubiquitin-activating E1 family.
   
 0.915
2.t00108
RING finger protein, putative.
   
 0.897
57.t00010
Uncharacterized protein.
    
 
 0.885
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.