STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
45.t00008Uncharacterized protein. (634 aa)    
Predicted Functional Partners:
3.t00072
U5 snRNP-specific 200kd protein, putative.
   
 0.990
89.t00016
Splicing factor Prp8, putative.
   
 0.990
74.t00043
Small nuclear ribonucleoprotein Sm D3.
   
 0.988
153.t00011
Uncharacterized protein.
   
 0.985
51.t00011
Pre-mRNA splicing factor, putative.
   
 0.984
3.t00063
DIM1 family protein, putative.
   
 0.980
201.t00013
DEAD/DEAH box helicase, putative; Belongs to the DEAD box helicase family.
   
 0.978
77.t00019
Microfibril-associated protein, putative.
   
 0.975
EHI_021380
U5 small nuclear ribonucleoprotein subunit, putative.
   
 0.974
48.t00017
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.974
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.