STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
186.t00019Uncharacterized protein. (344 aa)    
Predicted Functional Partners:
5.t00083
DEAD/DEAH box helicase, putative; Belongs to the DEAD box helicase family.
    
 0.509
3.t00028
DEAD/DEAH box helicase, putative; Belongs to the DEAD box helicase family.
    
 0.502
34.t00052
Polyadenylate-binding protein, putative.
   
 0.436
74.t00043
Small nuclear ribonucleoprotein Sm D3.
   
 
 0.432
12.t00007
RNA recognition motif domain containing protein.
   
 0.430
41.t00033
RNA recognition motif domain containing protein.
   
 0.430
267.t00010
Zinc finger protein, putative.
   
 0.429
EHI_110270
RNA recognition motif domain containing protein.
   
 0.423
147.t00007
Enhancer binding protein-1.
   
 0.423
193.t00006
Polyadenylate-binding protein, putative.
   
 0.423
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.