STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
138.t00005Uncharacterized protein; Belongs to the DOCK family. (2524 aa)    
Predicted Functional Partners:
8.t00018
Rho family GTPase.
   
 0.427
46.t00027
Rho family GTPase.
   
 0.422
110.t00006
Rho family GTPase.
   
 0.422
16.t00017
Rho family GTPase.
   
 0.419
34.t00015
AP-3 complex subunit delta.
   
  
 0.418
14.t00047
Rho family GTPase.
   
 0.417
69.t00033
Rho family GTPase.
   
 0.417
219.t00017
Cell division control protein 42, putative.
   
 0.417
4.t00075
Small GTPase RhoA, putative.
   
 0.416
87.t00013
Rho family GTPase.
   
 0.416
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.