STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
312.t00006Uncharacterized protein. (563 aa)    
Predicted Functional Partners:
23.t00003
Uncharacterized protein.
    
 
 0.991
274.t00008
Vacular protein sorting 33A, putative; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.983
641.t00003
Sec1 family domain containing protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.983
167.t00020
EhSyntaxin C.
   
 
 0.907
201.t00017
EhSyntaxin B.
   
 
 0.906
61.t00027
EhSyntaxin G.
   
 
 0.856
100.t00026
NUF1 protein, putative.
    
 
 0.855
200.t00003
EhSyntaxin D1.
    
 
 0.855
23.t00015
EhSyntaxin F.
   
 
 0.797
5.t00078
EhSyntaxin E; Belongs to the syntaxin family.
   
 
 0.797
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.