STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
222.t00012Uncharacterized protein. (240 aa)    
Predicted Functional Partners:
178.t00011
Uncharacterized protein.
   
  
 0.640
19.t00019
Ubiquitin-activating enzyme, putative.
     
 0.624
65.t00026
Autophagy protein apg7, putative.
     
 0.595
140.t00004
Uncharacterized protein.
    
 
 0.586
4.t00046
Ubiquitin-conjugating enzyme family protein.
    
 0.543
14.t00031
Uncharacterized protein.
   
 
 0.506
59.t00027
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
      
 0.455
205.t00014
RNA recognition motif domain containing protein.
   
  
 0.453
64.t00032
Ubiquitin, putative.
   
 
  0.429
95.t00003
HECT domain-containing protein.
   
 
 0.407
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.