STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
90.t00003Ubiquitin-protein ligase, putative. (661 aa)    
Predicted Functional Partners:
14.t00031
Uncharacterized protein.
   
 0.716
408.t00002
Ubiquitin-conjugating enzyme family protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.641
108.t00020
Ubiquitin-conjugating enzyme family protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.641
83.t00002
Proteasome regulatory subunit, putative.
   
 
 0.622
19.t00019
Ubiquitin-activating enzyme, putative.
   
 0.609
EHI_038690
Ubiquitin-activating enzyme E1 1, putative.
   
 0.606
334.t00009
Ubiquitin-activating enzyme, putative; Belongs to the ubiquitin-activating E1 family.
   
 0.606
51.t00013
Ubiquitin-conjugating enzyme family protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.603
294.t00005
RAD23 protein, putative.
   
 0.603
448.t00004
UV excision repair protein RAD23, putative.
   
 0.602
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.