STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
140.t00001DNA repair/transcription protein Mms19, putative. (868 aa)    
Predicted Functional Partners:
3.t00143
WD domain containing protein.
    
 0.996
14.t00024
Uncharacterized protein.
   
 0.994
197.t00012
DNA repair helicase, putative.
   
 0.953
297.t00005
DNA repair helicase, putative.
   
 0.953
167.t00005
DNA repair helicase, putative.
   
 0.889
321.t00010
Uncharacterized protein.
    
 0.857
53.t00034
DNA polymerase.
   
 0.840
233.t00003
Iron hydrogenase, putative; Belongs to the NARF family.
    
 0.829
33.t00007
Proteasome regulatory subunit, putative.
      
 0.801
281.t00001
DNA repair helicase, putative.
   
 
 0.740
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.