STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
188.t00008Short chain dehydrogenase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (311 aa)    
Predicted Functional Partners:
23.t00005
Dephospho-CoA kinase, putative.
 
 
 0.893
11.t00020
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.724
453.t00003
Septum formation protein maf, putative.
  
 
 0.710
171.t00014
Ankyrin repeat protein, putative.
  
 0.703
223.t00001
Fructose-1,6-bisphosphate aldolase, putative.
  
 
 0.693
11.t00060
Oxidoreductase, putative.
  
 
 0.658
520.t00002
DNA polymerase, putative.
   
 0.656
156.t00004
Ribose 5-phosphate isomerase, putative.
  
 
 0.656
19.t00043
Beta-galactosidase, putative.
  
  
 0.653
256.t00010
B-keto acyl reductase, putative; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.652
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.