STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
346.t00005Exosome complex exonuclease, putative; Belongs to the RNR ribonuclease family. (901 aa)    
Predicted Functional Partners:
91.t00009
Exosome complex exonuclease, putative.
   
 0.995
75.t00036
3' exoribonuclease family protein.
   
 0.994
203.t00019
Uncharacterized protein.
   
 0.993
256.t00007
Exosome complex exonuclease RRP4, putative.
   
 0.993
180.t00014
3' exoribonuclease family protein.
   
 0.993
120.t00012
Elongation factor-1alpha, putative.
   
 0.980
201.t00018
Exosome component 10, putative.
   
 0.973
178.t00012
Uncharacterized protein.
   
 0.973
117.t00038
3' exoribonuclease family protein.
   
 0.967
131.t00001
DEAD/DEAH box helicase, putative.
   
 0.967
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.