STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
436.t00002Topoisomerase, putative. (365 aa)    
Predicted Functional Partners:
370.t00004
Uncharacterized protein.
  
 
 
0.919
406.t00005
Topoisomerase, putative.
  
 
 
0.918
48.t00019
Zinc finger protein containing CCHC type domain.
   
 
 0.729
131.t00001
DEAD/DEAH box helicase, putative.
   
 
 0.717
78.t00002
Uncharacterized protein.
   
   0.612
414.t00003
DEAD/DEAH box helicase, putative.
   
 
 0.575
171.t00022
RNA-dependent RNA polymerase.
    
 
 0.538
201.t00018
Exosome component 10, putative.
   
 
 0.528
178.t00012
Uncharacterized protein.
   
 
 0.521
284.t00010
Importin, putative.
   
 
 0.484
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.