STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
2.t00100Vacuolar protein sorting-associated protein 45B, putative; Belongs to the STXBP/unc-18/SEC1 family. (542 aa)    
Predicted Functional Partners:
39.t00047
Uncharacterized protein.
 
      0.821
40.t00040
Uncharacterized protein.
 
      0.776
274.t00008
Vacular protein sorting 33A, putative; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.747
100.t00026
NUF1 protein, putative.
   
 
 0.685
312.t00006
Uncharacterized protein.
    
 0.651
142.t00032
Uncharacterized protein.
     
 0.638
1.t00005
Syntaxin, putative.
    
 
 0.617
141.t00010
EhSyntaxin A.
    
 
 0.617
327.t00006
Syntaxin, putative.
    
 
 0.617
20.t00039
Uncharacterized protein.
   
 
 0.601
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.