STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EhVPS26Vacuolar sorting protein 26, putative. (413 aa)    
Predicted Functional Partners:
vsp
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 0.987
Vps35-1
Vacuolar sorting protein 35-1.
   
 0.962
EHI_004400
Uncharacterized protein.
    
 0.925
6.t00047
Vacuolar protein sorting 35, putative.
   
 0.908
41.t00003
Uncharacterized protein.
   
 0.908
11.t00029
Vacuolar protein sorting 35, putative.
   
 0.908
180.t00019
Vacuolar protein sorting 35, putative.
   
 0.908
EHI_168080
Vacuolar protein sorting35, putative.
   
 0.877
89.t00019
PX domain protein.
   
 
 0.724
EhRab7A
Small GTPase Rab7A.
    
 
 0.684
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.