STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caf1CAF1 family ribonuclease, putative. (311 aa)    
Predicted Functional Partners:
78.t00002
Uncharacterized protein.
   
 0.994
120.t00017
Uncharacterized protein.
   
 0.993
163.t00015
CCR4/NOT transcription complex subunit 3, putative.
   
 0.993
57.t00010
Uncharacterized protein.
   
 0.993
1.t00039
Uncharacterized protein.
   
 0.930
391.t00002
Uncharacterized protein.
   
 0.930
15.t00053
Uncharacterized protein.
   
 0.928
109.t00016
Uncharacterized protein.
   
 0.927
7.t00046
CAF1 family ribonuclease, putative.
  
  
 
0.901
86.t00005
Glutamine cyclotransferase, putative.
   
 0.767
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.