STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EhRabX35Small GTPase EhRabX35. (194 aa)    
Predicted Functional Partners:
201.t00023
Rab family GTPase.
  
 
 0.586
79.t00016
Rab GDP dissociation inhibitor, putative.
   
 0.578
EHI_167060
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.572
34.t00007
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.572
25.t00001
Rab geranylgeranyltransferase alpha subunit, putative.
   
 0.570
EhGGTIIb
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
   
 
 0.551
EHI_051090
GTP-binding protein, putative.
  
 
 0.516
206.t00008
F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 
 0.510
EhRabK1
Small GTPase EhRabK1.
  
0.503
EhRabN2
Small GTPase EhRabN2.
  
0.492
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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