STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ00938.1Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-). (239 aa)    
Predicted Functional Partners:
SFJ00877.1
Amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-).
 
  0.990
SFJ00910.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 0.966
SFJ00968.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.939
SFJ24391.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
  0.861
SFJ39365.1
Amino acid ABC transporter membrane protein 1, PAAT family (TC 3.A.1.3.-).
  
  0.855
SFJ39393.1
Amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-).
  
  0.853
SFJ30036.1
Amino acid ABC transporter membrane protein 1, PAAT family (TC 3.A.1.3.-).
  
  0.849
SFJ30008.1
Polar amino acid transport system permease protein.
  
  0.846
SFJ38658.1
Polar amino acid transport system permease protein.
  
  0.844
SFJ24098.1
Hpt domain-containing protein.
   
 0.841
Your Current Organism:
Celeribacter halophilus
NCBI taxonomy Id: 576117
Other names: C. halophilus, CGMCC 1.8891, Celeribacter halophilus (Wang et al. 2012) Lai et al. 2014, DSM 26270, Huaishuia halophila, Huaishuia halophila Wang et al. 2012, LMG 24854, LMG:24854, MCCC 1A06432, Pseudoruegeria sp. ZXM137, strain ZXM137
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