STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI96923.1Hypothetical protein. (70 aa)    
Predicted Functional Partners:
SFI96894.1
Pilus assembly protein CpaB.
 
  
 0.851
SFI96610.1
Prepilin peptidase CpaA.
 
  
 0.812
SFI96784.1
Pilus assembly protein CpaE.
 
  
 0.796
SFJ44756.1
Flp pilus assembly protein TadG.
 
    0.709
SFJ49549.1
LuxR family transcriptional regulator.
  
    0.690
SFI96665.1
TPR repeat-containing protein.
 
     0.672
SFJ44793.1
TadE-like protein.
 
    0.671
SFJ95892.1
Hypothetical protein.
  
     0.640
SFJ44774.1
TadE-like protein.
 
    0.621
SFI96946.1
Hypothetical protein.
 
    
0.611
Your Current Organism:
Celeribacter halophilus
NCBI taxonomy Id: 576117
Other names: C. halophilus, CGMCC 1.8891, Celeribacter halophilus (Wang et al. 2012) Lai et al. 2014, DSM 26270, Huaishuia halophila, Huaishuia halophila Wang et al. 2012, LMG 24854, LMG:24854, MCCC 1A06432, Pseudoruegeria sp. ZXM137, strain ZXM137
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.