STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI97666.1EcsC protein family protein. (256 aa)    
Predicted Functional Partners:
SFI97636.1
Predicted N-acetyltransferase YhbS.
       0.832
SFI97608.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
       0.649
SFJ68882.1
Hypothetical protein.
  
     0.601
SFJ64375.1
Hypothetical protein.
  
     0.563
SFJ00017.1
Apolipoprotein D and lipocalin family protein.
  
     0.560
SFJ02426.1
Hypothetical protein.
  
     0.558
SFJ27149.1
Hypothetical protein.
  
     0.550
SFJ24656.1
Protein of unknown function.
  
     0.504
SFJ01821.1
Hypothetical protein.
  
     0.476
SFJ57199.1
Rhomboid family protein.
  
     0.464
Your Current Organism:
Celeribacter halophilus
NCBI taxonomy Id: 576117
Other names: C. halophilus, CGMCC 1.8891, Celeribacter halophilus (Wang et al. 2012) Lai et al. 2014, DSM 26270, Huaishuia halophila, Huaishuia halophila Wang et al. 2012, LMG 24854, LMG:24854, MCCC 1A06432, Pseudoruegeria sp. ZXM137, strain ZXM137
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.