Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFI97972.1 | SFJ36817.1 | SAMN04488138_10163 | SAMN04488138_10483 | TolB amino-terminal domain-containing protein. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.895 |
SFI97972.1 | SFJ44094.1 | SAMN04488138_10163 | SAMN04488138_10518 | TolB amino-terminal domain-containing protein. | TPR repeat-containing protein. | 0.747 |
SFI97972.1 | SFJ61216.1 | SAMN04488138_10163 | SAMN04488138_10745 | TolB amino-terminal domain-containing protein. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.672 |
SFI97972.1 | SFJ67731.1 | SAMN04488138_10163 | SAMN04488138_10816 | TolB amino-terminal domain-containing protein. | ATP diphosphatase. | 0.698 |
SFI97972.1 | SFJ85924.1 | SAMN04488138_10163 | SAMN04488138_11281 | TolB amino-terminal domain-containing protein. | TPR repeat-containing protein. | 0.747 |
SFI97972.1 | SFK13542.1 | SAMN04488138_10163 | SAMN04488138_1371 | TolB amino-terminal domain-containing protein. | Hypothetical protein. | 0.684 |
SFI97972.1 | SFK15964.1 | SAMN04488138_10163 | SAMN04488138_1441 | TolB amino-terminal domain-containing protein. | Hypothetical protein. | 0.684 |
SFI97972.1 | moaA | SAMN04488138_10163 | SAMN04488138_101265 | TolB amino-terminal domain-containing protein. | Cyclic pyranopterin monophosphate synthase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. | 0.676 |
SFI97972.1 | ndk | SAMN04488138_10163 | SAMN04488138_108139 | TolB amino-terminal domain-containing protein. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.672 |
SFI97972.1 | ribB | SAMN04488138_10163 | SAMN04488138_10535 | TolB amino-terminal domain-containing protein. | GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.935 |
SFJ36817.1 | SFI97972.1 | SAMN04488138_10483 | SAMN04488138_10163 | His Kinase A (phospho-acceptor) domain-containing protein. | TolB amino-terminal domain-containing protein. | 0.895 |
SFJ36817.1 | SFJ44094.1 | SAMN04488138_10483 | SAMN04488138_10518 | His Kinase A (phospho-acceptor) domain-containing protein. | TPR repeat-containing protein. | 0.845 |
SFJ36817.1 | SFJ61216.1 | SAMN04488138_10483 | SAMN04488138_10745 | His Kinase A (phospho-acceptor) domain-containing protein. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.940 |
SFJ36817.1 | SFJ67731.1 | SAMN04488138_10483 | SAMN04488138_10816 | His Kinase A (phospho-acceptor) domain-containing protein. | ATP diphosphatase. | 0.899 |
SFJ36817.1 | SFJ85924.1 | SAMN04488138_10483 | SAMN04488138_11281 | His Kinase A (phospho-acceptor) domain-containing protein. | TPR repeat-containing protein. | 0.845 |
SFJ36817.1 | SFK13542.1 | SAMN04488138_10483 | SAMN04488138_1371 | His Kinase A (phospho-acceptor) domain-containing protein. | Hypothetical protein. | 0.987 |
SFJ36817.1 | SFK15964.1 | SAMN04488138_10483 | SAMN04488138_1441 | His Kinase A (phospho-acceptor) domain-containing protein. | Hypothetical protein. | 0.987 |
SFJ36817.1 | moaA | SAMN04488138_10483 | SAMN04488138_101265 | His Kinase A (phospho-acceptor) domain-containing protein. | Cyclic pyranopterin monophosphate synthase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. | 0.886 |
SFJ36817.1 | ndk | SAMN04488138_10483 | SAMN04488138_108139 | His Kinase A (phospho-acceptor) domain-containing protein. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.928 |
SFJ36817.1 | ribB | SAMN04488138_10483 | SAMN04488138_10535 | His Kinase A (phospho-acceptor) domain-containing protein. | GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.965 |
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