STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ12721.1Hypothetical protein. (197 aa)    
Predicted Functional Partners:
SFJ12688.1
MioC protein.
       0.785
SFJ12619.1
Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
       0.773
SFJ12652.1
ferredoxin--NADP+ reductase.
       0.773
SFJ12585.1
Aspartate dehydrogenase.
       0.625
SFJ12398.1
Phenylpropionate dioxygenase, large terminal subunit.
       0.612
SFJ12500.1
Catechol-2,3-dioxygenase.
       0.610
SFJ12549.1
Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family.
  
    0.604
SFJ12470.1
Pimeloyl-ACP methyl ester carboxylesterase.
       0.589
SFJ12529.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
       0.589
SFJ12428.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
       0.588
Your Current Organism:
Celeribacter halophilus
NCBI taxonomy Id: 576117
Other names: C. halophilus, CGMCC 1.8891, Celeribacter halophilus (Wang et al. 2012) Lai et al. 2014, DSM 26270, Huaishuia halophila, Huaishuia halophila Wang et al. 2012, LMG 24854, LMG:24854, MCCC 1A06432, Pseudoruegeria sp. ZXM137, strain ZXM137
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