STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ27205.1Fe-S cluster assembly ATP-binding protein. (253 aa)    
Predicted Functional Partners:
SFJ27084.1
Iron-regulated ABC transporter membrane component SufB.
 
 0.999
SFJ27227.1
Fe-S cluster assembly protein SufD.
 
 0.999
SFJ27281.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 0.998
SFJ29611.1
FeS assembly SUF system protein.
  
 0.965
SFJ69789.1
NifU homolog involved in Fe-S cluster formation.
  
  
 0.946
SFJ27256.1
Hypothetical protein.
     
 0.910
SFJ82760.1
Cysteine desulfuration protein SufE.
 
   0.855
SFJ39856.1
Selenocysteine lyase/Cysteine desulfurase.
  
 0.849
SFK01235.1
Selenocysteine lyase/Cysteine desulfurase.
  
 0.841
SFJ27096.1
Uncharacterized conserved protein YbjQ, UPF0145 family; Belongs to the UPF0145 family.
  
  
 0.749
Your Current Organism:
Celeribacter halophilus
NCBI taxonomy Id: 576117
Other names: C. halophilus, CGMCC 1.8891, Celeribacter halophilus (Wang et al. 2012) Lai et al. 2014, DSM 26270, Huaishuia halophila, Huaishuia halophila Wang et al. 2012, LMG 24854, LMG:24854, MCCC 1A06432, Pseudoruegeria sp. ZXM137, strain ZXM137
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