STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ23567.1Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL. (365 aa)    
Predicted Functional Partners:
SFJ23593.1
Two-component system, NtrC family, nitrogen regulation response regulator GlnG.
 0.997
SFJ25509.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
  
 0.996
SFJ62138.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
  
 0.996
SFJ36817.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 
 0.965
SFJ24098.1
Hpt domain-containing protein.
 
 
0.952
SFJ36784.1
PAS fold.
 
 
0.948
SFJ23542.1
tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
  
  
 0.928
SFJ23644.1
Two-component system, NtrC family, nitrogen regulation response regulator NtrX.
 0.893
SFJ74949.1
Hypothetical protein.
 
 
0.893
SFJ82920.1
DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.
 0.881
Your Current Organism:
Celeribacter halophilus
NCBI taxonomy Id: 576117
Other names: C. halophilus, CGMCC 1.8891, Celeribacter halophilus (Wang et al. 2012) Lai et al. 2014, DSM 26270, Huaishuia halophila, Huaishuia halophila Wang et al. 2012, LMG 24854, LMG:24854, MCCC 1A06432, Pseudoruegeria sp. ZXM137, strain ZXM137
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.