STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ29935.1Acetate CoA/acetoacetate CoA-transferase alpha subunit. (230 aa)    
Predicted Functional Partners:
SFI97010.1
3-oxoacid CoA-transferase subunit B.
 0.999
SFJ29909.1
3-oxoacid CoA-transferase subunit B.
 0.999
SFK04912.1
3-oxoadipate CoA-transferase beta subunit.
 0.999
SFJ29861.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.851
SFJ29883.1
Acetylornithine deacetylase.
 
    0.809
SFJ29957.1
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
    0.781
SFJ29982.1
Polar amino acid transport system ATP-binding protein.
  
    0.774
SFJ01907.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 
 0.763
SFJ99679.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.763
SFJ30008.1
Polar amino acid transport system permease protein.
  
    0.743
Your Current Organism:
Celeribacter halophilus
NCBI taxonomy Id: 576117
Other names: C. halophilus, CGMCC 1.8891, Celeribacter halophilus (Wang et al. 2012) Lai et al. 2014, DSM 26270, Huaishuia halophila, Huaishuia halophila Wang et al. 2012, LMG 24854, LMG:24854, MCCC 1A06432, Pseudoruegeria sp. ZXM137, strain ZXM137
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