STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ23915.1Cellulose synthase (UDP-forming). (614 aa)    
Predicted Functional Partners:
SFJ23887.1
Protein of unknown function.
 
 
  0.956
SFJ23973.1
Protein of unknown function.
 
 
  0.956
SFJ44094.1
TPR repeat-containing protein.
  
 
 0.906
SFJ85924.1
TPR repeat-containing protein.
  
 
 0.906
SFJ24022.1
Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
    0.860
SFJ24051.1
Response regulator receiver domain-containing protein.
 
    0.849
SFJ55381.1
UDP-glucuronate 4-epimerase.
  
 
  0.815
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
     
 0.814
SFJ23945.1
Surface polysaccharide O-acyltransferase, integral membrane enzyme.
       0.780
SFJ23871.1
Hypothetical protein.
       0.773
Your Current Organism:
Celeribacter halophilus
NCBI taxonomy Id: 576117
Other names: C. halophilus, CGMCC 1.8891, Celeribacter halophilus (Wang et al. 2012) Lai et al. 2014, DSM 26270, Huaishuia halophila, Huaishuia halophila Wang et al. 2012, LMG 24854, LMG:24854, MCCC 1A06432, Pseudoruegeria sp. ZXM137, strain ZXM137
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