Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFJ15008.1 | SFJ23993.1 | SAMN04488138_102150 | SAMN04488138_10332 | STAS domain-containing protein. | Serine/threonine-protein kinase RsbW. | 0.975 |
SFJ15008.1 | SFJ24051.1 | SAMN04488138_102150 | SAMN04488138_10334 | STAS domain-containing protein. | Response regulator receiver domain-containing protein. | 0.842 |
SFJ15008.1 | SFJ24098.1 | SAMN04488138_102150 | SAMN04488138_10336 | STAS domain-containing protein. | Hpt domain-containing protein. | 0.960 |
SFJ15008.1 | SFJ44990.1 | SAMN04488138_102150 | SAMN04488138_10560 | STAS domain-containing protein. | Haem-NO-binding. | 0.770 |
SFJ15008.1 | SFJ86483.1 | SAMN04488138_102150 | SAMN04488138_112107 | STAS domain-containing protein. | Flagellar motility protein MotE, a chaperone for MotC folding. | 0.695 |
SFJ15008.1 | SFJ86504.1 | SAMN04488138_102150 | SAMN04488138_112108 | STAS domain-containing protein. | Chemotaxis protein MotA. | 0.696 |
SFJ15008.1 | SFK03682.1 | SAMN04488138_102150 | SAMN04488138_1223 | STAS domain-containing protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.961 |
SFJ15008.1 | flgH | SAMN04488138_102150 | SAMN04488138_11215 | STAS domain-containing protein. | Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.761 |
SFJ23993.1 | SFJ15008.1 | SAMN04488138_10332 | SAMN04488138_102150 | Serine/threonine-protein kinase RsbW. | STAS domain-containing protein. | 0.975 |
SFJ23993.1 | SFJ24022.1 | SAMN04488138_10332 | SAMN04488138_10333 | Serine/threonine-protein kinase RsbW. | Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.993 |
SFJ23993.1 | SFJ24051.1 | SAMN04488138_10332 | SAMN04488138_10334 | Serine/threonine-protein kinase RsbW. | Response regulator receiver domain-containing protein. | 0.953 |
SFJ23993.1 | SFJ24098.1 | SAMN04488138_10332 | SAMN04488138_10336 | Serine/threonine-protein kinase RsbW. | Hpt domain-containing protein. | 0.943 |
SFJ23993.1 | SFJ44990.1 | SAMN04488138_10332 | SAMN04488138_10560 | Serine/threonine-protein kinase RsbW. | Haem-NO-binding. | 0.811 |
SFJ23993.1 | SFJ63800.1 | SAMN04488138_10332 | SAMN04488138_107156 | Serine/threonine-protein kinase RsbW. | Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.975 |
SFJ23993.1 | SFJ86483.1 | SAMN04488138_10332 | SAMN04488138_112107 | Serine/threonine-protein kinase RsbW. | Flagellar motility protein MotE, a chaperone for MotC folding. | 0.811 |
SFJ23993.1 | SFJ86504.1 | SAMN04488138_10332 | SAMN04488138_112108 | Serine/threonine-protein kinase RsbW. | Chemotaxis protein MotA. | 0.811 |
SFJ23993.1 | SFK03682.1 | SAMN04488138_10332 | SAMN04488138_1223 | Serine/threonine-protein kinase RsbW. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.902 |
SFJ23993.1 | flgH | SAMN04488138_10332 | SAMN04488138_11215 | Serine/threonine-protein kinase RsbW. | Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.811 |
SFJ24022.1 | SFJ23993.1 | SAMN04488138_10333 | SAMN04488138_10332 | Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family. | Serine/threonine-protein kinase RsbW. | 0.993 |
SFJ24022.1 | SFJ24051.1 | SAMN04488138_10333 | SAMN04488138_10334 | Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family. | Response regulator receiver domain-containing protein. | 0.990 |
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