Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFJ23363.1 | SFJ23388.1 | SAMN04488138_1037 | SAMN04488138_1038 | Hypothetical protein. | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.855 |
SFJ23363.1 | SFJ23418.1 | SAMN04488138_1037 | SAMN04488138_1039 | Hypothetical protein. | Coenzyme Q-binding protein COQ10. | 0.668 |
SFJ23388.1 | SFJ23363.1 | SAMN04488138_1038 | SAMN04488138_1037 | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | Hypothetical protein. | 0.855 |
SFJ23388.1 | SFJ23418.1 | SAMN04488138_1038 | SAMN04488138_1039 | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | Coenzyme Q-binding protein COQ10. | 0.732 |
SFJ23418.1 | SFJ23363.1 | SAMN04488138_1039 | SAMN04488138_1037 | Coenzyme Q-binding protein COQ10. | Hypothetical protein. | 0.668 |
SFJ23418.1 | SFJ23388.1 | SAMN04488138_1039 | SAMN04488138_1038 | Coenzyme Q-binding protein COQ10. | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.732 |
SFJ23418.1 | SFJ25055.1 | SAMN04488138_1039 | SAMN04488138_10372 | Coenzyme Q-binding protein COQ10. | Uncharacterized conserved protein, contains Mth938-like domain. | 0.426 |
SFJ23418.1 | SFJ64003.1 | SAMN04488138_1039 | SAMN04488138_107165 | Coenzyme Q-binding protein COQ10. | 2-octaprenyl-6-methoxyphenol hydroxylase. | 0.454 |
SFJ23418.1 | SFJ74418.1 | SAMN04488138_1039 | SAMN04488138_10991 | Coenzyme Q-binding protein COQ10. | 2-octaprenylphenol hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 0.550 |
SFJ23418.1 | SFK00845.1 | SAMN04488138_1039 | SAMN04488138_11928 | Coenzyme Q-binding protein COQ10. | 2-octaprenyl-6-methoxyphenol hydroxylase. | 0.456 |
SFJ23418.1 | SFK05116.1 | SAMN04488138_1039 | SAMN04488138_12321 | Coenzyme Q-binding protein COQ10. | Putative cyclase. | 0.444 |
SFJ23418.1 | SFK08688.1 | SAMN04488138_1039 | SAMN04488138_1288 | Coenzyme Q-binding protein COQ10. | Glutathione S-transferase. | 0.626 |
SFJ23418.1 | ubiA | SAMN04488138_1039 | SAMN04488138_11257 | Coenzyme Q-binding protein COQ10. | 4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.655 |
SFJ23418.1 | ubiG | SAMN04488138_1039 | SAMN04488138_12219 | Coenzyme Q-binding protein COQ10. | 3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. | 0.689 |
SFJ25055.1 | SFJ23418.1 | SAMN04488138_10372 | SAMN04488138_1039 | Uncharacterized conserved protein, contains Mth938-like domain. | Coenzyme Q-binding protein COQ10. | 0.426 |
SFJ64003.1 | SFJ23418.1 | SAMN04488138_107165 | SAMN04488138_1039 | 2-octaprenyl-6-methoxyphenol hydroxylase. | Coenzyme Q-binding protein COQ10. | 0.454 |
SFJ64003.1 | SFJ74418.1 | SAMN04488138_107165 | SAMN04488138_10991 | 2-octaprenyl-6-methoxyphenol hydroxylase. | 2-octaprenylphenol hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 0.526 |
SFJ64003.1 | SFK00845.1 | SAMN04488138_107165 | SAMN04488138_11928 | 2-octaprenyl-6-methoxyphenol hydroxylase. | 2-octaprenyl-6-methoxyphenol hydroxylase. | 0.937 |
SFJ64003.1 | SFK08688.1 | SAMN04488138_107165 | SAMN04488138_1288 | 2-octaprenyl-6-methoxyphenol hydroxylase. | Glutathione S-transferase. | 0.540 |
SFJ64003.1 | ubiA | SAMN04488138_107165 | SAMN04488138_11257 | 2-octaprenyl-6-methoxyphenol hydroxylase. | 4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.657 |
page 1 of 3