STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ37812.1lactose/L-arabinose transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (353 aa)    
Predicted Functional Partners:
SFJ37715.1
Multiple sugar transport system permease protein.
  0.938
SFJ37743.1
Multiple sugar transport system permease protein.
 
  0.925
SFK07674.1
ATP-binding cassette, subfamily B.
 
     
0.899
SFK12909.1
Multiple sugar transport system permease protein.
  
  0.898
SFJ68948.1
ATP-binding cassette, subfamily B.
 
     
0.893
SFJ78389.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.881
SFK12894.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
 
  0.877
SFI98654.1
Multiple sugar transport system permease protein.
 
  0.874
SFI98626.1
Multiple sugar transport system permease protein.
  
  0.869
SFJ12092.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.837
Your Current Organism:
Celeribacter halophilus
NCBI taxonomy Id: 576117
Other names: C. halophilus, CGMCC 1.8891, Celeribacter halophilus (Wang et al. 2012) Lai et al. 2014, DSM 26270, Huaishuia halophila, Huaishuia halophila Wang et al. 2012, LMG 24854, LMG:24854, MCCC 1A06432, Pseudoruegeria sp. ZXM137, strain ZXM137
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