STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ39542.1Ribose transport system ATP-binding protein. (514 aa)    
Predicted Functional Partners:
SFJ39568.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.978
SFJ39601.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-).
 
  0.959
SFJ65188.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
  0.950
SFK10738.1
Rhamnose ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
  0.949
SFK10759.1
Monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-); Belongs to the binding-protein-dependent transport system permease family.
  0.945
SFK06948.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
  0.934
SFK12838.1
Monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-); Belongs to the binding-protein-dependent transport system permease family.
  0.916
SFK06930.1
Monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-); Belongs to the binding-protein-dependent transport system permease family.
  0.891
SFK12805.1
Ribose transport system substrate-binding protein.
 
  0.865
SFJ39445.1
LacI family transcriptional regulator.
  
  0.853
Your Current Organism:
Celeribacter halophilus
NCBI taxonomy Id: 576117
Other names: C. halophilus, CGMCC 1.8891, Celeribacter halophilus (Wang et al. 2012) Lai et al. 2014, DSM 26270, Huaishuia halophila, Huaishuia halophila Wang et al. 2012, LMG 24854, LMG:24854, MCCC 1A06432, Pseudoruegeria sp. ZXM137, strain ZXM137
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