Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFJ27084.1 | SFJ27205.1 | SAMN04488138_103141 | SAMN04488138_103147 | Iron-regulated ABC transporter membrane component SufB. | Fe-S cluster assembly ATP-binding protein. | 0.999 |
SFJ27084.1 | SFJ27227.1 | SAMN04488138_103141 | SAMN04488138_103148 | Iron-regulated ABC transporter membrane component SufB. | Fe-S cluster assembly protein SufD. | 0.999 |
SFJ27084.1 | SFJ39856.1 | SAMN04488138_103141 | SAMN04488138_104213 | Iron-regulated ABC transporter membrane component SufB. | Selenocysteine lyase/Cysteine desulfurase. | 0.836 |
SFJ27084.1 | SFJ69789.1 | SAMN04488138_103141 | SAMN04488138_108112 | Iron-regulated ABC transporter membrane component SufB. | NifU homolog involved in Fe-S cluster formation. | 0.853 |
SFJ27084.1 | SFJ82760.1 | SAMN04488138_103141 | SAMN04488138_111111 | Iron-regulated ABC transporter membrane component SufB. | Cysteine desulfuration protein SufE. | 0.879 |
SFJ27205.1 | SFJ27084.1 | SAMN04488138_103147 | SAMN04488138_103141 | Fe-S cluster assembly ATP-binding protein. | Iron-regulated ABC transporter membrane component SufB. | 0.999 |
SFJ27205.1 | SFJ27227.1 | SAMN04488138_103147 | SAMN04488138_103148 | Fe-S cluster assembly ATP-binding protein. | Fe-S cluster assembly protein SufD. | 0.999 |
SFJ27205.1 | SFJ39856.1 | SAMN04488138_103147 | SAMN04488138_104213 | Fe-S cluster assembly ATP-binding protein. | Selenocysteine lyase/Cysteine desulfurase. | 0.849 |
SFJ27205.1 | SFJ69789.1 | SAMN04488138_103147 | SAMN04488138_108112 | Fe-S cluster assembly ATP-binding protein. | NifU homolog involved in Fe-S cluster formation. | 0.946 |
SFJ27205.1 | SFJ82760.1 | SAMN04488138_103147 | SAMN04488138_111111 | Fe-S cluster assembly ATP-binding protein. | Cysteine desulfuration protein SufE. | 0.855 |
SFJ27227.1 | SFJ27084.1 | SAMN04488138_103148 | SAMN04488138_103141 | Fe-S cluster assembly protein SufD. | Iron-regulated ABC transporter membrane component SufB. | 0.999 |
SFJ27227.1 | SFJ27205.1 | SAMN04488138_103148 | SAMN04488138_103147 | Fe-S cluster assembly protein SufD. | Fe-S cluster assembly ATP-binding protein. | 0.999 |
SFJ27227.1 | SFJ39856.1 | SAMN04488138_103148 | SAMN04488138_104213 | Fe-S cluster assembly protein SufD. | Selenocysteine lyase/Cysteine desulfurase. | 0.824 |
SFJ27227.1 | SFJ69789.1 | SAMN04488138_103148 | SAMN04488138_108112 | Fe-S cluster assembly protein SufD. | NifU homolog involved in Fe-S cluster formation. | 0.852 |
SFJ27227.1 | SFJ82760.1 | SAMN04488138_103148 | SAMN04488138_111111 | Fe-S cluster assembly protein SufD. | Cysteine desulfuration protein SufE. | 0.853 |
SFJ39813.1 | SFJ39834.1 | SAMN04488138_104211 | SAMN04488138_104212 | L-2-amino-thiazoline-4-carboxylic acid hydrolase. | Glycine/D-amino acid oxidase. | 0.938 |
SFJ39813.1 | SFJ39856.1 | SAMN04488138_104211 | SAMN04488138_104213 | L-2-amino-thiazoline-4-carboxylic acid hydrolase. | Selenocysteine lyase/Cysteine desulfurase. | 0.822 |
SFJ39813.1 | SFJ39894.1 | SAMN04488138_104211 | SAMN04488138_104215 | L-2-amino-thiazoline-4-carboxylic acid hydrolase. | Peptide/nickel transport system permease protein. | 0.794 |
SFJ39813.1 | SFJ39922.1 | SAMN04488138_104211 | SAMN04488138_104216 | L-2-amino-thiazoline-4-carboxylic acid hydrolase. | Peptide/nickel transport system permease protein. | 0.827 |
SFJ39834.1 | SFJ39813.1 | SAMN04488138_104212 | SAMN04488138_104211 | Glycine/D-amino acid oxidase. | L-2-amino-thiazoline-4-carboxylic acid hydrolase. | 0.938 |
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