STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ35687.1Hydrogenase-1 operon protein HyaF. (279 aa)    
Predicted Functional Partners:
SFJ35714.1
Hydrogenase-1 operon protein HyaE; Belongs to the HupG/HyaE family.
 
  
 0.996
SFJ35772.1
Hydrogenase 1 maturation peptidase HyaD. Aspartic peptidase. MEROPS family A31.
 
  
 0.985
SFJ35665.1
[NiFe] hydrogenase assembly chaperone, HybE family.
 
  
 0.981
SFJ35796.1
Ni/Fe-hydrogenase 1 B-type cytochrome subunit.
 
  
 0.980
SFJ62444.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
  
 0.963
SFJ35878.1
Hydrogenase small subunit.
 
 
 0.962
SFJ35744.1
Hydrogenase expression/formation protein HypC.
 
  
 0.957
hypA
Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
  
 0.956
SFJ35963.1
Ferredoxin hydrogenase small subunit.
 
 
 0.952
SFJ35854.1
Hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
  
 0.945
Your Current Organism:
Celeribacter halophilus
NCBI taxonomy Id: 576117
Other names: C. halophilus, CGMCC 1.8891, Celeribacter halophilus (Wang et al. 2012) Lai et al. 2014, DSM 26270, Huaishuia halophila, Huaishuia halophila Wang et al. 2012, LMG 24854, LMG:24854, MCCC 1A06432, Pseudoruegeria sp. ZXM137, strain ZXM137
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.