STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ36152.1Predicted NAD/FAD-binding protein. (426 aa)    
Predicted Functional Partners:
SFJ36203.1
Cyclopropane-fatty-acyl-phospholipid synthase.
  
 0.997
SFJ68903.1
Cyclopropane-fatty-acyl-phospholipid synthase.
  
 0.988
SFJ36176.1
Hypothetical protein.
  
 0.979
SFJ36235.1
Short-chain dehydrogenase.
 
   
 0.962
SFJ44937.1
anti-ECFsigma factor, ChrR.
 
  
 0.946
SFJ36264.1
Uncharacterized membrane protein.
 
     0.862
SFJ44917.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
  
 0.847
ctaG
Cytochrome c oxidase assembly protein subunit 11; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.
 
      0.844
SFJ68926.1
Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family.
 
   
 0.713
SFJ36295.1
Uncaracterized surface protein containing fasciclin (FAS1) repeats.
     
 0.597
Your Current Organism:
Celeribacter halophilus
NCBI taxonomy Id: 576117
Other names: C. halophilus, CGMCC 1.8891, Celeribacter halophilus (Wang et al. 2012) Lai et al. 2014, DSM 26270, Huaishuia halophila, Huaishuia halophila Wang et al. 2012, LMG 24854, LMG:24854, MCCC 1A06432, Pseudoruegeria sp. ZXM137, strain ZXM137
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