STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ36472.15-deoxyglucuronate isomerase. (284 aa)    
Predicted Functional Partners:
SFJ36528.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
 
 0.999
SFJ36499.1
5-dehydro-2-deoxygluconokinase.
 
 
 0.997
SFK02044.1
5-dehydro-2-deoxygluconokinase.
 
 
 0.997
SFJ36578.1
2-keto-myo-inositol dehydratase.
 
  
 0.983
SFJ36444.1
Fructose-bisphosphate aldolase.
 
  
 0.978
SFJ36396.1
Myo-inositol 2-dehydrogenase.
 
  
 0.970
SFJ36550.1
Predicted dehydrogenase.
 
  
 0.942
SFJ36601.1
Predicted dehydrogenase.
 
  
 0.930
SFJ34634.1
Type II restriction/modification system, DNA methylase subunit YeeA.
   
    0.800
SFJ39494.1
Sugar phosphate isomerase/epimerase.
  
  
 0.790
Your Current Organism:
Celeribacter halophilus
NCBI taxonomy Id: 576117
Other names: C. halophilus, CGMCC 1.8891, Celeribacter halophilus (Wang et al. 2012) Lai et al. 2014, DSM 26270, Huaishuia halophila, Huaishuia halophila Wang et al. 2012, LMG 24854, LMG:24854, MCCC 1A06432, Pseudoruegeria sp. ZXM137, strain ZXM137
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.