node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFJ46102.1 | SFJ46728.1 | SAMN04488138_105116 | SAMN04488138_105146 | ATP-dependent helicase HrpB. | ATP-dependent RNA helicase RhlE. | 0.950 |
SFJ46102.1 | fusA | SAMN04488138_105116 | SAMN04488138_1071 | ATP-dependent helicase HrpB. | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | 0.934 |
SFJ46102.1 | rplD | SAMN04488138_105116 | SAMN04488138_1523 | ATP-dependent helicase HrpB. | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | 0.943 |
SFJ46728.1 | SFJ46102.1 | SAMN04488138_105146 | SAMN04488138_105116 | ATP-dependent RNA helicase RhlE. | ATP-dependent helicase HrpB. | 0.950 |
SFJ46728.1 | fusA | SAMN04488138_105146 | SAMN04488138_1071 | ATP-dependent RNA helicase RhlE. | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | 0.983 |
SFJ46728.1 | nnrD | SAMN04488138_105146 | SAMN04488138_10384 | ATP-dependent RNA helicase RhlE. | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specif [...] | 0.982 |
SFJ46728.1 | pnp | SAMN04488138_105146 | SAMN04488138_107151 | ATP-dependent RNA helicase RhlE. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.981 |
SFJ46728.1 | rplC | SAMN04488138_105146 | SAMN04488138_1522 | ATP-dependent RNA helicase RhlE. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.949 |
SFJ46728.1 | rplD | SAMN04488138_105146 | SAMN04488138_1523 | ATP-dependent RNA helicase RhlE. | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | 0.940 |
SFJ46728.1 | rplK | SAMN04488138_105146 | SAMN04488138_10711 | ATP-dependent RNA helicase RhlE. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.921 |
SFJ46728.1 | rplM | SAMN04488138_105146 | SAMN04488138_102175 | ATP-dependent RNA helicase RhlE. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.931 |
SFJ46728.1 | rplQ | SAMN04488138_105146 | SAMN04488138_105273 | ATP-dependent RNA helicase RhlE. | LSU ribosomal protein L17P. | 0.922 |
SFJ46728.1 | rplX | SAMN04488138_105146 | SAMN04488138_11321 | ATP-dependent RNA helicase RhlE. | LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.927 |
fusA | SFJ46102.1 | SAMN04488138_1071 | SAMN04488138_105116 | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | ATP-dependent helicase HrpB. | 0.934 |
fusA | SFJ46728.1 | SAMN04488138_1071 | SAMN04488138_105146 | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | ATP-dependent RNA helicase RhlE. | 0.983 |
fusA | pnp | SAMN04488138_1071 | SAMN04488138_107151 | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.928 |
fusA | rplC | SAMN04488138_1071 | SAMN04488138_1522 | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.999 |
fusA | rplD | SAMN04488138_1071 | SAMN04488138_1523 | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | 0.999 |
fusA | rplK | SAMN04488138_1071 | SAMN04488138_10711 | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.999 |
fusA | rplM | SAMN04488138_1071 | SAMN04488138_102175 | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |