STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ44990.1Haem-NO-binding. (197 aa)    
Predicted Functional Partners:
SFJ63822.1
Serine/threonine-protein kinase RsbW.
  
    0.999
SFJ84698.1
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
    0.999
SFK03682.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
  
 0.999
SFJ44964.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
  
 0.987
SFJ72560.1
HPt (histidine-containing phosphotransfer) domain-containing protein.
 
    0.980
SFJ63800.1
Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
    0.973
SFJ24022.1
Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
    0.963
SFJ44756.1
Flp pilus assembly protein TadG.
   
    0.949
SFJ24051.1
Response regulator receiver domain-containing protein.
  
    0.861
SFJ24098.1
Hpt domain-containing protein.
  
 
 0.849
Your Current Organism:
Celeribacter halophilus
NCBI taxonomy Id: 576117
Other names: C. halophilus, CGMCC 1.8891, Celeribacter halophilus (Wang et al. 2012) Lai et al. 2014, DSM 26270, Huaishuia halophila, Huaishuia halophila Wang et al. 2012, LMG 24854, LMG:24854, MCCC 1A06432, Pseudoruegeria sp. ZXM137, strain ZXM137
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