STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ56706.1Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family. (65 aa)    
Predicted Functional Partners:
SFJ17455.1
Protein of unknown function.
 
    0.922
SFJ68526.1
Lipid-binding SYLF domain-containing protein.
  
    0.785
SFJ56730.1
Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.559
SFJ75245.1
Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family.
  
  
 0.484
SFJ52698.1
BON domain-containing protein.
  
    0.471
SFJ23945.1
Surface polysaccharide O-acyltransferase, integral membrane enzyme.
   
    0.461
SFJ55155.1
Capsular polysaccharide transport system permease protein.
   
    0.461
SFJ44536.1
Polysaccharide export outer membrane protein.
   
    0.446
SFK06857.1
Polysaccharide export outer membrane protein.
   
    0.446
SFJ55176.1
Capsular polysaccharide transport system permease protein.
  
    0.443
Your Current Organism:
Celeribacter halophilus
NCBI taxonomy Id: 576117
Other names: C. halophilus, CGMCC 1.8891, Celeribacter halophilus (Wang et al. 2012) Lai et al. 2014, DSM 26270, Huaishuia halophila, Huaishuia halophila Wang et al. 2012, LMG 24854, LMG:24854, MCCC 1A06432, Pseudoruegeria sp. ZXM137, strain ZXM137
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.