Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFJ12758.1 | SFJ47004.1 | SAMN04488138_10284 | SAMN04488138_105159 | Pyridine nucleotide-disulfide oxidoreductase family protein. | Thioredoxin reductase (NADPH). | 0.898 |
SFJ12758.1 | SFJ64064.1 | SAMN04488138_10284 | SAMN04488138_107168 | Pyridine nucleotide-disulfide oxidoreductase family protein. | Thioredoxin. | 0.831 |
SFJ12758.1 | SFJ76973.1 | SAMN04488138_10284 | SAMN04488138_1108 | Pyridine nucleotide-disulfide oxidoreductase family protein. | Pyridine nucleotide-disulphide oxidoreductase. | 0.812 |
SFJ12758.1 | SFJ95936.1 | SAMN04488138_10284 | SAMN04488138_11626 | Pyridine nucleotide-disulfide oxidoreductase family protein. | NADPH-glutathione reductase; Maintains high levels of reduced glutathione. | 0.461 |
SFJ47004.1 | SFJ12758.1 | SAMN04488138_105159 | SAMN04488138_10284 | Thioredoxin reductase (NADPH). | Pyridine nucleotide-disulfide oxidoreductase family protein. | 0.898 |
SFJ47004.1 | SFJ64064.1 | SAMN04488138_105159 | SAMN04488138_107168 | Thioredoxin reductase (NADPH). | Thioredoxin. | 0.954 |
SFJ47004.1 | SFJ95936.1 | SAMN04488138_105159 | SAMN04488138_11626 | Thioredoxin reductase (NADPH). | NADPH-glutathione reductase; Maintains high levels of reduced glutathione. | 0.595 |
SFJ47004.1 | dnaJ | SAMN04488138_105159 | SAMN04488138_12231 | Thioredoxin reductase (NADPH). | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.446 |
SFJ64024.1 | SFJ64045.1 | SAMN04488138_107166 | SAMN04488138_107167 | Hypothetical protein; Belongs to the UPF0434 family. | Hypothetical protein. | 0.855 |
SFJ64024.1 | SFJ64064.1 | SAMN04488138_107166 | SAMN04488138_107168 | Hypothetical protein; Belongs to the UPF0434 family. | Thioredoxin. | 0.811 |
SFJ64045.1 | SFJ64024.1 | SAMN04488138_107167 | SAMN04488138_107166 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0434 family. | 0.855 |
SFJ64045.1 | SFJ64064.1 | SAMN04488138_107167 | SAMN04488138_107168 | Hypothetical protein. | Thioredoxin. | 0.869 |
SFJ64064.1 | SFJ12758.1 | SAMN04488138_107168 | SAMN04488138_10284 | Thioredoxin. | Pyridine nucleotide-disulfide oxidoreductase family protein. | 0.831 |
SFJ64064.1 | SFJ47004.1 | SAMN04488138_107168 | SAMN04488138_105159 | Thioredoxin. | Thioredoxin reductase (NADPH). | 0.954 |
SFJ64064.1 | SFJ64024.1 | SAMN04488138_107168 | SAMN04488138_107166 | Thioredoxin. | Hypothetical protein; Belongs to the UPF0434 family. | 0.811 |
SFJ64064.1 | SFJ64045.1 | SAMN04488138_107168 | SAMN04488138_107167 | Thioredoxin. | Hypothetical protein. | 0.869 |
SFJ64064.1 | SFJ76973.1 | SAMN04488138_107168 | SAMN04488138_1108 | Thioredoxin. | Pyridine nucleotide-disulphide oxidoreductase. | 0.923 |
SFJ64064.1 | SFJ95936.1 | SAMN04488138_107168 | SAMN04488138_11626 | Thioredoxin. | NADPH-glutathione reductase; Maintains high levels of reduced glutathione. | 0.954 |
SFJ64064.1 | dnaJ | SAMN04488138_107168 | SAMN04488138_12231 | Thioredoxin. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.789 |
SFJ64064.1 | grpE | SAMN04488138_107168 | SAMN04488138_1099 | Thioredoxin. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.833 |
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