Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFJ11624.1 | SFJ56320.1 | SAMN04488138_10245 | SAMN04488138_106146 | Protein of unknown function. | ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. | 0.500 |
SFJ11624.1 | SFJ70917.1 | SAMN04488138_10245 | SAMN04488138_108169 | Protein of unknown function. | dCTP deaminase. | 0.763 |
SFJ11624.1 | SFJ73362.1 | SAMN04488138_10245 | SAMN04488138_10939 | Protein of unknown function. | Two-component system, sensor histidine kinase RegB. | 0.746 |
SFJ11624.1 | SFJ73477.1 | SAMN04488138_10245 | SAMN04488138_10944 | Protein of unknown function. | Hypothetical protein. | 0.723 |
SFJ11624.1 | SFK02949.1 | SAMN04488138_10245 | SAMN04488138_12124 | Protein of unknown function. | Hypothetical protein. | 0.499 |
SFJ11624.1 | hisS | SAMN04488138_10245 | SAMN04488138_106148 | Protein of unknown function. | histidyl-tRNA synthetase. | 0.720 |
SFJ56320.1 | SFJ11624.1 | SAMN04488138_106146 | SAMN04488138_10245 | ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. | Protein of unknown function. | 0.500 |
SFJ56320.1 | SFJ70917.1 | SAMN04488138_106146 | SAMN04488138_108169 | ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. | dCTP deaminase. | 0.657 |
SFJ56320.1 | SFJ73477.1 | SAMN04488138_106146 | SAMN04488138_10944 | ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. | Hypothetical protein. | 0.484 |
SFJ56320.1 | SFK02949.1 | SAMN04488138_106146 | SAMN04488138_12124 | ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. | Hypothetical protein. | 0.573 |
SFJ56320.1 | hisS | SAMN04488138_106146 | SAMN04488138_106148 | ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. | histidyl-tRNA synthetase. | 0.998 |
SFJ67731.1 | SFJ70917.1 | SAMN04488138_10816 | SAMN04488138_108169 | ATP diphosphatase. | dCTP deaminase. | 0.932 |
SFJ67731.1 | dut | SAMN04488138_10816 | SAMN04488138_106169 | ATP diphosphatase. | dUTP pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.446 |
SFJ67731.1 | pyrG | SAMN04488138_10816 | SAMN04488138_101173 | ATP diphosphatase. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.925 |
SFJ70917.1 | SFJ11624.1 | SAMN04488138_108169 | SAMN04488138_10245 | dCTP deaminase. | Protein of unknown function. | 0.763 |
SFJ70917.1 | SFJ56320.1 | SAMN04488138_108169 | SAMN04488138_106146 | dCTP deaminase. | ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. | 0.657 |
SFJ70917.1 | SFJ67731.1 | SAMN04488138_108169 | SAMN04488138_10816 | dCTP deaminase. | ATP diphosphatase. | 0.932 |
SFJ70917.1 | SFJ73362.1 | SAMN04488138_108169 | SAMN04488138_10939 | dCTP deaminase. | Two-component system, sensor histidine kinase RegB. | 0.663 |
SFJ70917.1 | SFJ73477.1 | SAMN04488138_108169 | SAMN04488138_10944 | dCTP deaminase. | Hypothetical protein. | 0.795 |
SFJ70917.1 | SFK02949.1 | SAMN04488138_108169 | SAMN04488138_12124 | dCTP deaminase. | Hypothetical protein. | 0.757 |
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