SFJ79293.1 protein (Celeribacter halophilus)

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second shell of interactors

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Score

SFJ79293.1

Uncharacterized membrane protein. (226 aa)

Predicted Functional Partners:

SFJ79262.1

0.678

SFJ79222.1

0.625

SFJ79241.1

0.548

SFJ98229.1

0.463

Your Current Organism:

Celeribacter halophilus

NCBI taxonomy Id: 576117
Other names: C. halophilus, CGMCC 1.8891, Celeribacter halophilus (Wang et al. 2012) Lai et al. 2014, DSM 26270, Huaishuia halophila, Huaishuia halophila Wang et al. 2012, LMG 24854, LMG:24854, MCCC 1A06432, Pseudoruegeria sp. ZXM137, strain ZXM137

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFJ79222.1	SFJ79241.1	SAMN04488138_110117	SAMN04488138_110118	Uncharacterized protein involved in response to NO.	cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.	0.437
SFJ79222.1	SFJ79293.1	SAMN04488138_110117	SAMN04488138_110120	Uncharacterized protein involved in response to NO.	Uncharacterized membrane protein.	0.625
SFJ79241.1	SFJ79222.1	SAMN04488138_110118	SAMN04488138_110117	cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.	Uncharacterized protein involved in response to NO.	0.437
SFJ79241.1	SFJ79262.1	SAMN04488138_110118	SAMN04488138_110119	cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.	Hypothetical protein.	0.553
SFJ79241.1	SFJ79293.1	SAMN04488138_110118	SAMN04488138_110120	cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.	Uncharacterized membrane protein.	0.548
SFJ79262.1	SFJ79241.1	SAMN04488138_110119	SAMN04488138_110118	Hypothetical protein.	cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.	0.553
SFJ79262.1	SFJ79293.1	SAMN04488138_110119	SAMN04488138_110120	Hypothetical protein.	Uncharacterized membrane protein.	0.678
SFJ79293.1	SFJ79222.1	SAMN04488138_110120	SAMN04488138_110117	Uncharacterized membrane protein.	Uncharacterized protein involved in response to NO.	0.625
SFJ79293.1	SFJ79241.1	SAMN04488138_110120	SAMN04488138_110118	Uncharacterized membrane protein.	cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.	0.548
SFJ79293.1	SFJ79262.1	SAMN04488138_110120	SAMN04488138_110119	Uncharacterized membrane protein.	Hypothetical protein.	0.678
SFJ79293.1	SFJ98229.1	SAMN04488138_110120	SAMN04488138_11754	Uncharacterized membrane protein.	Heat shock protein HslJ.	0.463
SFJ98229.1	SFJ79293.1	SAMN04488138_11754	SAMN04488138_110120	Heat shock protein HslJ.	Uncharacterized membrane protein.	0.463

Network Stats

number of nodes:

11

number of edges:

42

average node degree:

7.64

avg. local clustering coefficient:

0.803

expected number of edges:

11

PPI enrichment p-value:

3.1e-12

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005976

Polysaccharide metabolic process

8 of 71

1.73

3.34

4.03e-10

GO:0000271

Polysaccharide biosynthetic process

6 of 65

1.65

2.35

7.59e-07

GO:0016051

Carbohydrate biosynthetic process

7 of 97

1.54

2.32

1.40e-07

GO:0033692

Cellular polysaccharide biosynthetic process

5 of 47

1.71

2.12

9.80e-06

GO:0005975

Carbohydrate metabolic process

9 of 237

1.26

1.78

3.28e-08

(more ...)

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0008767

UDP-galactopyranose mutase activity

2 of 2

2.68

0.93

0.0210

GO:0016740

Transferase activity

8 of 832

0.66

0.43

0.0210

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:5129

O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferases group 1

8 of 28

2.14

5.64

4.67e-14

CL:5130

O-Antigen nucleotide sugar biosynthesis

7 of 23

2.16

5.09

3.32e-12

CL:5119

Amino sugar and nucleotide sugar metabolism, and Polysaccharide biosynthetic process

10 of 83

1.76

4.43

3.57e-15

CL:5117

Amino sugar and nucleotide sugar metabolism, and Polysaccharide biosynthetic process

11 of 101

1.72

4.4

2.67e-16

CL:5158

Mannose-6-phosphate isomerase, and NAD dependent epimerase/dehydratase family

3 of 6

2.38

2.29

4.59e-05

(more ...)

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00541

O-Antigen nucleotide sugar biosynthesis

5 of 44

1.74

2.31

3.15e-06

map00520

Amino sugar and nucleotide sugar metabolism

4 of 68

1.45

1.3

0.00062

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0548

Nucleotidyltransferase

3 of 60

1.38

0.69

0.0329

KW-0808

Transferase

7 of 695

0.68

0.41

0.0329

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