Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFJ06132.1 | SFJ74163.1 | SAMN04488138_101347 | SAMN04488138_10978 | iron(III) transport system permease protein. | iron(III) transport system permease protein. | 0.668 |
SFJ06132.1 | SFJ98243.1 | SAMN04488138_101347 | SAMN04488138_11756 | iron(III) transport system permease protein. | Thiamine transport system substrate-binding protein. | 0.543 |
SFJ06132.1 | thiQ | SAMN04488138_101347 | SAMN04488138_11758 | iron(III) transport system permease protein. | Thiamine transport system ATP-binding protein; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. | 0.552 |
SFJ74163.1 | SFJ06132.1 | SAMN04488138_10978 | SAMN04488138_101347 | iron(III) transport system permease protein. | iron(III) transport system permease protein. | 0.668 |
SFJ74163.1 | SFJ98243.1 | SAMN04488138_10978 | SAMN04488138_11756 | iron(III) transport system permease protein. | Thiamine transport system substrate-binding protein. | 0.543 |
SFJ74163.1 | thiQ | SAMN04488138_10978 | SAMN04488138_11758 | iron(III) transport system permease protein. | Thiamine transport system ATP-binding protein; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. | 0.552 |
SFJ81108.1 | thiQ | SAMN04488138_11122 | SAMN04488138_11758 | Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Thiamine transport system ATP-binding protein; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. | 0.781 |
SFJ83115.1 | thiQ | SAMN04488138_111130 | SAMN04488138_11758 | Peptidase family M41. | Thiamine transport system ATP-binding protein; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. | 0.473 |
SFJ96101.1 | thiQ | SAMN04488138_11637 | SAMN04488138_11758 | Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Thiamine transport system ATP-binding protein; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. | 0.446 |
SFJ98229.1 | SFJ98243.1 | SAMN04488138_11754 | SAMN04488138_11756 | Heat shock protein HslJ. | Thiamine transport system substrate-binding protein. | 0.405 |
SFJ98229.1 | SFJ98259.1 | SAMN04488138_11754 | SAMN04488138_11757 | Heat shock protein HslJ. | Thiamine transport system permease protein. | 0.418 |
SFJ98229.1 | thiQ | SAMN04488138_11754 | SAMN04488138_11758 | Heat shock protein HslJ. | Thiamine transport system ATP-binding protein; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. | 0.405 |
SFJ98243.1 | SFJ06132.1 | SAMN04488138_11756 | SAMN04488138_101347 | Thiamine transport system substrate-binding protein. | iron(III) transport system permease protein. | 0.543 |
SFJ98243.1 | SFJ74163.1 | SAMN04488138_11756 | SAMN04488138_10978 | Thiamine transport system substrate-binding protein. | iron(III) transport system permease protein. | 0.543 |
SFJ98243.1 | SFJ98229.1 | SAMN04488138_11756 | SAMN04488138_11754 | Thiamine transport system substrate-binding protein. | Heat shock protein HslJ. | 0.405 |
SFJ98243.1 | SFJ98259.1 | SAMN04488138_11756 | SAMN04488138_11757 | Thiamine transport system substrate-binding protein. | Thiamine transport system permease protein. | 0.996 |
SFJ98243.1 | thiQ | SAMN04488138_11756 | SAMN04488138_11758 | Thiamine transport system substrate-binding protein. | Thiamine transport system ATP-binding protein; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. | 0.999 |
SFJ98259.1 | SFJ98229.1 | SAMN04488138_11757 | SAMN04488138_11754 | Thiamine transport system permease protein. | Heat shock protein HslJ. | 0.418 |
SFJ98259.1 | SFJ98243.1 | SAMN04488138_11757 | SAMN04488138_11756 | Thiamine transport system permease protein. | Thiamine transport system substrate-binding protein. | 0.996 |
SFJ98259.1 | thiQ | SAMN04488138_11757 | SAMN04488138_11758 | Thiamine transport system permease protein. | Thiamine transport system ATP-binding protein; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. | 0.996 |
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