STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ99792.1Hypothetical protein. (122 aa)    
Predicted Functional Partners:
SFJ99776.1
Na+/proline symporter.
  
    0.950
SFJ99814.1
Response regulator receiver domain-containing protein.
       0.791
SFJ99836.1
Hypothetical protein.
 
     0.768
SFJ99759.1
Flagellar motor switch protein FliM.
 
     0.748
SFJ44299.1
Hypothetical protein.
  
     0.533
SFI97273.1
Hypothetical protein.
  
     0.524
SFJ46232.1
Mechanosensitive ion channel.
  
     0.511
SFJ45383.1
Protein of unknown function.
  
     0.486
SFJ53554.1
Hypothetical protein.
  
     0.474
SFJ29353.1
Protein of unknown function.
  
     0.470
Your Current Organism:
Celeribacter halophilus
NCBI taxonomy Id: 576117
Other names: C. halophilus, CGMCC 1.8891, Celeribacter halophilus (Wang et al. 2012) Lai et al. 2014, DSM 26270, Huaishuia halophila, Huaishuia halophila Wang et al. 2012, LMG 24854, LMG:24854, MCCC 1A06432, Pseudoruegeria sp. ZXM137, strain ZXM137
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