Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFI97273.1 | SFJ99759.1 | SAMN04488138_10140 | SAMN04488138_11839 | Hypothetical protein. | Flagellar motor switch protein FliM. | 0.535 |
SFI97273.1 | SFJ99792.1 | SAMN04488138_10140 | SAMN04488138_11841 | Hypothetical protein. | Hypothetical protein. | 0.524 |
SFJ29353.1 | SFJ99792.1 | SAMN04488138_103228 | SAMN04488138_11841 | Protein of unknown function. | Hypothetical protein. | 0.470 |
SFJ44299.1 | SFJ99792.1 | SAMN04488138_10526 | SAMN04488138_11841 | Hypothetical protein. | Hypothetical protein. | 0.533 |
SFJ45383.1 | SFJ46232.1 | SAMN04488138_10579 | SAMN04488138_105122 | Protein of unknown function. | Mechanosensitive ion channel. | 0.428 |
SFJ45383.1 | SFJ99792.1 | SAMN04488138_10579 | SAMN04488138_11841 | Protein of unknown function. | Hypothetical protein. | 0.486 |
SFJ46232.1 | SFJ45383.1 | SAMN04488138_105122 | SAMN04488138_10579 | Mechanosensitive ion channel. | Protein of unknown function. | 0.428 |
SFJ46232.1 | SFJ99792.1 | SAMN04488138_105122 | SAMN04488138_11841 | Mechanosensitive ion channel. | Hypothetical protein. | 0.511 |
SFJ53554.1 | SFJ99792.1 | SAMN04488138_10640 | SAMN04488138_11841 | Hypothetical protein. | Hypothetical protein. | 0.474 |
SFJ99759.1 | SFI97273.1 | SAMN04488138_11839 | SAMN04488138_10140 | Flagellar motor switch protein FliM. | Hypothetical protein. | 0.535 |
SFJ99759.1 | SFJ99776.1 | SAMN04488138_11839 | SAMN04488138_11840 | Flagellar motor switch protein FliM. | Na+/proline symporter. | 0.706 |
SFJ99759.1 | SFJ99792.1 | SAMN04488138_11839 | SAMN04488138_11841 | Flagellar motor switch protein FliM. | Hypothetical protein. | 0.748 |
SFJ99759.1 | SFJ99814.1 | SAMN04488138_11839 | SAMN04488138_11842 | Flagellar motor switch protein FliM. | Response regulator receiver domain-containing protein. | 0.610 |
SFJ99759.1 | SFJ99836.1 | SAMN04488138_11839 | SAMN04488138_11843 | Flagellar motor switch protein FliM. | Hypothetical protein. | 0.587 |
SFJ99776.1 | SFJ99759.1 | SAMN04488138_11840 | SAMN04488138_11839 | Na+/proline symporter. | Flagellar motor switch protein FliM. | 0.706 |
SFJ99776.1 | SFJ99792.1 | SAMN04488138_11840 | SAMN04488138_11841 | Na+/proline symporter. | Hypothetical protein. | 0.950 |
SFJ99776.1 | SFJ99814.1 | SAMN04488138_11840 | SAMN04488138_11842 | Na+/proline symporter. | Response regulator receiver domain-containing protein. | 0.933 |
SFJ99776.1 | SFJ99836.1 | SAMN04488138_11840 | SAMN04488138_11843 | Na+/proline symporter. | Hypothetical protein. | 0.842 |
SFJ99792.1 | SFI97273.1 | SAMN04488138_11841 | SAMN04488138_10140 | Hypothetical protein. | Hypothetical protein. | 0.524 |
SFJ99792.1 | SFJ29353.1 | SAMN04488138_11841 | SAMN04488138_103228 | Hypothetical protein. | Protein of unknown function. | 0.470 |
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