STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK01982.1Fructuronate reductase; Belongs to the mannitol dehydrogenase family. (474 aa)    
Predicted Functional Partners:
SFK02002.1
(R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase.
 
  
 0.901
SFK14353.1
Glucuronate isomerase.
 
 
 0.881
SFJ65260.1
Altronate hydrolase.
 
 0.829
SFK01962.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
     0.801
SFK06544.1
Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.791
SFK01945.1
C4-dicarboxylate transporter, DctM subunit.
       0.773
xylA
D-xylose isomerase; Belongs to the xylose isomerase family.
     
 0.749
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 0.718
uxuA-2
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 0.717
SFK01923.1
Tripartite ATP-independent transporter solute receptor, DctP family.
       0.714
Your Current Organism:
Celeribacter halophilus
NCBI taxonomy Id: 576117
Other names: C. halophilus, CGMCC 1.8891, Celeribacter halophilus (Wang et al. 2012) Lai et al. 2014, DSM 26270, Huaishuia halophila, Huaishuia halophila Wang et al. 2012, LMG 24854, LMG:24854, MCCC 1A06432, Pseudoruegeria sp. ZXM137, strain ZXM137
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