STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK05016.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (238 aa)    
Predicted Functional Partners:
SFK05036.1
Muconolactone delta-isomerase.
 
     0.808
SFJ64356.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
  0.785
SFK05078.1
Short-chain fatty acids transporter.
  
    0.774
SFK05057.1
Hypothetical protein.
       0.773
SFK05116.1
Putative cyclase.
 
    0.740
SFJ31523.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
     0.738
SFK05092.1
3-hydroxybutyryl-CoA dehydrogenase.
  
  0.729
SFJ39965.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG.
  
 
  0.718
SFK08653.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.704
SFJ25868.1
[Acyl-carrier-protein] S-malonyltransferase.
 
 0.669
Your Current Organism:
Celeribacter halophilus
NCBI taxonomy Id: 576117
Other names: C. halophilus, CGMCC 1.8891, Celeribacter halophilus (Wang et al. 2012) Lai et al. 2014, DSM 26270, Huaishuia halophila, Huaishuia halophila Wang et al. 2012, LMG 24854, LMG:24854, MCCC 1A06432, Pseudoruegeria sp. ZXM137, strain ZXM137
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