STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK05810.1NitT/TauT family transport system substrate-binding protein. (330 aa)    
Predicted Functional Partners:
SFK05846.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
  0.965
SFK05827.1
NitT/TauT family transport system ATP-binding protein.
 
 
  0.956
SFJ19474.1
NitT/TauT family transport system permease protein.
 
 
  0.818
SFJ19443.1
NitT/TauT family transport system permease protein.
 
 
  0.809
SFK05866.1
3-phenylpropionate/cinnamic acid dioxygenase, small subunit.
 
     0.809
SFK05793.1
NitT/TauT family transport system substrate-binding protein.
 
    
0.792
SFK17620.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
  0.782
SFK05885.1
Phenylpropionate dioxygenase, large terminal subunit.
       0.757
SFK05901.1
SnoaL-like polyketide cyclase.
       0.757
SFK05924.1
Phytanoyl-CoA dioxygenase (PhyH).
       0.757
Your Current Organism:
Celeribacter halophilus
NCBI taxonomy Id: 576117
Other names: C. halophilus, CGMCC 1.8891, Celeribacter halophilus (Wang et al. 2012) Lai et al. 2014, DSM 26270, Huaishuia halophila, Huaishuia halophila Wang et al. 2012, LMG 24854, LMG:24854, MCCC 1A06432, Pseudoruegeria sp. ZXM137, strain ZXM137
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